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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1393889 chr15:97372064 A/G SELS chr15:101811214-101817700:- 0.8 7.03 9.41E-12 Box Plot
BLCA rs1393889 chr15:97372064 A/G UNC45A chr15:91473410-91497323:+ 0.66 5.98 5.02E-9 Box Plot
BLCA rs139454533 chr1:121178485 GGTA/G NBPF14 chr1:148003642-148025863:- 0.28 6.19 1.51E-9 Box Plot
BLCA rs1395274 chr18:61404464 C/T CXXC1 chr18:47808713-47814674:- 0.43 6.04 3.6E-9 Box Plot
BLCA rs1395274 chr18:61404464 C/T ELAC1 chr18:48494361-48514491:+ 0.56 6.27 9.83E-10 Box Plot
BLCA rs1395274 chr18:61404464 C/T KIAA1468 chr18:59854491-59975062:+ 0.41 6.22 1.27E-9 Box Plot
BLCA rs1395274 chr18:61404464 C/T MBD1 chr18:47793252-47808144:- 0.58 6.61 1.32E-10 Box Plot
BLCA rs1395274 chr18:61404464 C/T NARS chr18:55267888-55289445:- 0.49 6.19 1.51E-9 Box Plot
BLCA rs1395274 chr18:61404464 C/T TXNL1 chr18:54264439-54318831:- 0.56 6.29 8.71E-10 Box Plot
BLCA rs139543332 chr2:101070139 T/TTTG LOC285359 chr3:101431278-101432259:+ 0.34 6.12 2.37E-9 Box Plot
BLCA rs139572187 chr11:109432358 C/CAT KRTAP13-1 chr21:31768392-31769140:+ 0.16 6.88 2.42E-11 Box Plot
BLCA rs1396211 chr17:53600307 C/T POU2F1 chr1:167190066-167396582:+ -0.39 -6.59 1.49E-10 Box Plot
BLCA rs1397480 chr8:25090069 C/T CHMP7 chr8:23101150-23119513:+ -0.83 -6.43 3.88E-10 Box Plot
BLCA rs1397480 chr8:25090069 C/T CNOT7 chr8:17082473-17104387:- -0.85 -6.37 5.49E-10 Box Plot
BLCA rs1397480 chr8:25090069 C/T DCTN6 chr8:30013813-30041156:+ -0.89 -6.58 1.5E-10 Box Plot